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Genomics and Transcriptomics Platform




GENOMICS LABORATORY


Technical Staff:
Eva Companys
E-mail: ecompanysa@santpau.cat / sequenciacio_ir@santpau.cat

Functions:
  • Next-generation sequencing: full transcriptome genotyping, RNA-Seq, Ampli-Seq, ChIP-Seq, amplicon sequencing and sequencing and identification of microorganisms.
  • Capillary sequencing: mutational analysis, microorganism identification and validation of cell lines.
  • Analysis of fragments: microsatellite instability, loss of heterozygosity studies in pathological conditions, mutation detection and genotyping, quantification of gene copy numbers, methylation studies and studies of polymorphisms associated with disease states.
Equipment:

  • Ion Torrent Personal Genome Machine.
  • Ion OneTouch (TM) System.
  • 3130xl Genetic Analyzer capillary electrophoresis sequencer.


LABORATORI DE TRANSCRIPTÒMICA

Technical Staff:
Elena Serrano
E-mail: eserrano@santpau.cat / transcriptomica@santpau.cat

Funcions:

Hybridization and analysis of Affymetrix microarrays:
  • RNA and micro-RNA expression profiles in normal conditions and in diseases and treatment.
  • Loss of heterozygosity, copy number analysis and genome-wide mutation detection.
  • Genome-wide linkage and association studies.
  • Real time quantitative PCR (gene expression, allelic discrimination).
  • Nucleic acid quality assessment.
  • Quantification of nucleic acids (Bioanalyzer, Nanodrop).
Equipment:

  • Affymetrix array platform (upgrade 7G).
  • Real time quantitative PCR ABI 7900HT (384-well plates and TLDA).
  • Bioanalyzer 2100
  • Nanodrop 2000.
Grants:

  • HSCSP Research Institute. "Affymetrix Microarrays System". Joint financing: FEDER.
  • HSCSP Research Institute. "Real time quantitative PCR ABI Prism 7000". IF02/3693. Joint financing: FEDER.
  • HSCSP Research Institute. “DNA genetic analyzer and protein arrays platform for the Genomics and Proteomics area of the Technical Laboratory for scientific and technical support”. IF07/3675-1. Joint financing: FEDER.

Platforms Coordinator:
Elena Serrano
E-mail: eserrano@santpau.cat
Tel: 93 553 72 25


PRICE LIST 2016


FORM BIOANALIZER


FORM ION TORRENT PGM

FORM MICROARRAYS AFFIMETRIX

FORM qRT-PCR

FORM SEQ ABI 3130xl

 

 



 

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